Estimating orientations with flydra¶
![strict digraph {
animals -> onlinePosOri2D;
animals -> ufmfs;
onlinePosOri2D -> ufmfs;
ufmfs -> IBO [ arrowhead="none"];
imageOri2D -> OEF [ arrowhead="none"];
onlinePosOri2D -> retrackedPos2D;
ufmfs -> retrackedPos2D;
onlinePosOri2D -> ekfPos3D;
calib -> onlineOri3D;
calib -> OEF [ arrowhead="none"];
calib -> ekfPos3D;
calib -> IBO [ arrowhead="none"];
ekfPos3D -> OEF [ arrowhead="none"];
OEF -> Ori3DHZ;
Ori3DHZ -> core_analysis [ arrowhead="none"];
core_analysis -> Ori3D;
ekfPos3D -> IBO [ arrowhead="none"];
IBO -> imageOri2D;
onlinePosOri2D -> onlineOri3D;
animals [label="experiment"];
// onlinePos2D [label="online 2D position estimation"];
ufmfs [label="saved images (.ufmf)",style=filled];
imageOri2D [label="image based 2D orientation"];
IBO [ label = "image_based_orientation", style=filled,color=white ];
core_analysis [ label = "core_analysis.CachingAnalyzer", style=filled,color=white ];
OEF [ label = "orientation_ekf_fitter", style=filled,color=white ];
Ori3DHZ [label="3D orientation, Pluecker coords"];
Ori3D [label="smoothed 3D orientation, Cartesian coords"];
calib [label="calibration"];
ekfPos3D [label="EKF based 3D position"];
onlineOri3D [label="online 3D orientation"];
onlinePosOri2D [label="online 2D position and orientation",style=filled];
}](_images/graphviz-a895c09e1ad0fb443c7232bb118ef18e96bdda28.png)
Contents:
See also Data analysis (specifically the “Extracting longitudinal body orientation” section).
Contents:
See also Data analysis (specifically the “Extracting longitudinal body orientation” section).